FFAS03: Fold & Function Assignment System
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Godzik Lab

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Messages: All databases updated in October, 2009, PDB database is updated every Wednesday.
Databases of virulence factors (VFDB) and human proteins related to diseases (HUMSAVAR) are now available for FFAS searches.
1.Please, paste one amino-acid sequence in fasta format (if the fasta description line is included, make sure enter a new line after it)
2.Please, submit the next sequence only after completion of your previous search.
3.Sequences longer than 1000 aa should be split into (putative) domains.

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Select database(s) to be searched, and click Search (to select multiple databases hold down the CTRL key):
Databases of profiles:

Hot Paper and Paper of the Day:
Hot Paper from Godzik Lab     Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.
Paper of the Day     Berman HM, Burley SK, Chiu W, Sali A, Adzhubei A, Bourne PE, Bryant SH,Dunbrack RL Jr, Fidelis K, Frank J, Godzik A, Henrick K, Joachimiak A, HeymannB, Jones D, Markley JL, Moult J, Montelione GT, Orengo C, Rossmann MG, Rost B,Saibil H, Schwede T, Standley DM, Westbrook JD. Outcome of a workshop on archiving structural models of biological macromolecules. Structure. 2006 Aug;14(8):1211-7.

FFAS is supported by the NIH grant R01-GM087218-01
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